euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

157 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip549 chr1 42483965 42483965 + unknown germline . no 226 HIVEP3
srip2480 chr1 95801850 95801850 - unknown germline . no 226 .
srip3058 chr1 102568916 102568916 + unknown germline . no 226 .
srip4138 chr1 149308429 149308429 + unknown germline . no 226 LOC645262
srip5052 chr1 169524865 169524865 + unknown germline . no 226 F5
srip8110 chr10 23842050 23842050 - unknown germline . no 226 .
srip8461 chr10 25707693 25707693 - unknown germline . no 226 GPR158
srip9805 chr10 82972200 82972200 . unknown germline . no 226 .
srip10674 chr10 96998775 96998775 + unknown germline . no 226 PDLIM1
srip11825 chr10 124455224 124455224 + unknown germline . no 226 .
srip12542 chr11 15380252 15380252 + unknown germline . no 226 .
srip12795 chr11 25123346 25123346 - unknown germline . no 226 .
srip13813 chr11 33670130 33670130 + unknown germline . no 226 C11orf41
srip14536 chr11 43356948 43356948 + unknown germline . no 226 API5
srip14775 chr11 48360754 48360754 - unknown germline . no 226 .
srip15392 chr11 58171843 58171843 + unknown germline . no 226 .
srip17178 chr11 94684368 94684368 + unknown germline . no 226 .
srip18059 chr11 110377886 110377886 - unknown germline . no 226 .
srip18271 chr11 114895517 114895517 + unknown germline . no 226 .
srip18345 chr11 121131527 121131527 . unknown germline . no 226 .
srip19258 chr11 134305645 134305645 - unknown germline . no 226 .
srip19757 chr12 11191379 11191379 - unknown germline . no 226 PRH1-PRR4
srip19891 chr12 11219195 11219195 - unknown germline . no 226 PRH1-PRR4
srip20147 chr12 12933687 12933687 - unknown germline . no 226 APOLD1
srip20741 chr12 28226420 28226420 - unknown germline . no 226 .
srip22831 chr12 48929057 48929057 + unknown germline . no 226 .
srip23505 chr12 71020040 71020040 + unknown germline . no 226 PTPRB
srip23974 chr12 79338025 79338025 - unknown germline . no 226 SYT1
srip24632 chr12 84965140 84965140 + unknown germline . no 226 .
srip24895 chr12 85506283 85506283 + unknown germline . no 226 LRRIQ1
srip27352 chr13 27488117 27488117 + unknown germline . no 226 .
srip29637 chr13 61734491 61734491 + unknown germline . no 226 .
srip29745 chr13 64569846 64569846 - unknown germline . no 226 .
srip30982 chr13 79259790 79259790 - unknown germline . no 226 .
srip31985 chr13 86340151 86340151 - unknown germline . no 226 .
srip33541 chr13 104296230 104296230 - unknown germline . no 226 .
srip35221 chr14 28301256 28301256 + unknown germline . no 226 .
srip35466 chr14 31150813 31150813 - unknown germline . no 226 SCFD1
srip35577 chr14 34140131 34140131 - unknown germline . no 226 NPAS3
srip35873 chr14 36674752 36674752 + unknown germline . no 226 .
srip36304 chr14 39875089 39875089 + unknown germline . no 226 FBXO33
srip37915 chr14 68309965 68309965 - unknown germline . no 226 RAD51B
srip38631 chr14 86381803 86381803 - unknown germline . no 226 .
srip40219 chr15 47507335 47507335 - unknown germline . no 226 SEMA6D
srip41234 chr15 56251143 56251143 + unknown germline . no 226 NEDD4
srip42449 chr15 83551621 83551621 - unknown germline . no 226 HOMER2
srip43240 chr15 100931152 100931152 - unknown germline . no 226 .
srip45504 chr16 33992437 33992437 . unknown germline . no 226 .
srip46325 chr16 71028016 71028016 + unknown germline . no 226 HYDIN
srip47015 chr17 25303557 25303557 + unknown germline . no 226 .
srip47207 chr17 28398310 28398310 + unknown germline . no 226 EFCAB5
srip47691 chr17 32813625 32813625 + unknown germline . no 226 .
srip48978 chr18 15095255 15095255 - unknown germline . no 226 .
srip49000 chr18 18516660 18516660 . unknown germline . no 226 .
srip49167 chr18 27219193 27219193 - unknown germline . no 226 .
srip50190 chr18 50097749 50097749 - unknown germline . no 226 DCC
srip51612 chr18 74515281 74515281 - unknown germline . no 226 LOC100131655
srip51841 chr18 74960069 74960069 - unknown germline . no 226 .
srip53468 chr2 23191008 23191008 - unknown germline . no 226 .
srip53921 chr2 35879345 35879345 + unknown germline . no 226 .
srip54973 chr2 54523853 54523853 - unknown germline . no 226 ACYP2
srip56588 chr2 91624166 91624166 + unknown germline . no 226 .
srip57734 chr2 129573979 129573979 + unknown germline . no 226 .
srip57896 chr2 137426136 137426136 - unknown germline . no 226 .
srip58231 chr2 141852914 141852914 - unknown germline . no 226 LRP1B
srip59203 chr2 147020925 147020925 + unknown germline . no 226 .
srip60781 chr2 191478707 191478707 - unknown germline . no 226 .
srip62628 chr2 235519802 235519802 + unknown germline . no 226 .
srip63459 chr20 16479499 16479499 - unknown germline . no 226 KIF16B
srip64022 chr20 25895497 25895497 - unknown germline . no 226 .
srip64156 chr20 29591815 29591815 . unknown germline . no 226 .
srip64769 chr20 41952105 41952105 - unknown germline . no 226 .
srip65543 chr21 14390190 14390190 - unknown germline . no 226 .
srip65863 chr21 19517305 19517305 - unknown germline . no 226 .
srip66293 chr21 23626198 23626198 - unknown germline . no 226 .
srip66918 chr21 29069178 29069178 + unknown germline . no 226 .
srip67455 chr22 22486373 22486373 - unknown germline . no 226 IGL@
srip68740 chr22 44324597 44324597 - unknown germline . no 226 PNPLA3
srip70461 chr3 20748900 20748900 - unknown germline . no 226 .
srip70730 chr3 24987866 24987866 - unknown germline . no 226 .
srip72716 chr3 55788574 55788574 + unknown germline . no 226 ERC2
srip73919 chr3 75728590 75728590 - unknown germline . no 226 .
srip75081 chr3 84433390 84433390 + unknown germline . no 226 .
srip75292 chr3 84593281 84593281 . unknown germline . no 226 .
srip76206 chr3 101279650 101279650 + unknown germline . no 226 .
srip77251 chr3 123590719 123590719 + unknown germline . no 226 MYLK
srip78154 chr3 143121760 143121760 - unknown germline . no 226 SLC9A9
srip78651 chr3 151148549 151148549 - unknown germline . no 226 MED12L
srip80369 chr3 176091327 176091327 + unknown germline . no 226 .
srip80862 chr3 181192836 181192836 + unknown germline . no 226 .
srip81488 chr3 186372132 186372132 + unknown germline . no 226 .
srip82102 chr3 193354172 193354172 - unknown germline . no 226 OPA1
srip82995 chr4 18162684 18162684 - unknown germline . no 226 .
srip83539 chr4 23129614 23129614 . unknown germline . no 226 .
srip84707 chr4 47007787 47007787 - unknown germline . no 226 .
srip85065 chr4 49160459 49160459 - unknown germline . no 226 .
srip86161 chr4 66413931 66413931 + unknown germline . no 226 EPHA5
srip87039 chr4 71093306 71093306 + unknown germline . no 226 C4orf7
srip87332 chr4 80768529 80768529 + unknown germline . no 226 GDEP
srip87897 chr4 86607953 86607953 + unknown germline . no 226 ARHGAP24
srip90343 chr4 115132699 115132699 + unknown germline . no 226 .
srip90401 chr4 116741275 116741275 - unknown germline . no 226 .
srip90799 chr4 120717537 120717537 - unknown germline . no 226 .
srip92194 chr4 134596423 134596423 + unknown germline . no 226 .
srip92821 chr4 138177329 138177329 + unknown germline . no 226 .
srip94045 chr4 165231734 165231734 - unknown germline . no 226 MARCH1
srip95381 chr4 190659701 190659701 + unknown germline . no 226 .
srip95417 chr4 190816412 190816412 . unknown germline . no 226 .
srip95420 chr4 190842789 190842789 . unknown germline . no 226 .
srip97734 chr5 33633341 33633341 - unknown germline . no 226 ADAMTS12
srip99503 chr5 68263468 68263468 - unknown germline . no 226 .
srip100720 chr5 89450775 89450775 + unknown germline . no 226 .
srip101078 chr5 96866415 96866415 + unknown germline . no 226 .
srip101687 chr5 105935368 105935368 + unknown germline . no 226 .
srip103890 chr5 137130152 137130152 - unknown germline . no 226 .
srip104207 chr5 144331002 144331002 - unknown germline . no 226 .
srip104850 chr5 154873934 154873934 - unknown germline . no 226 .
srip105729 chr5 160435672 160435672 - unknown germline . no 226 .
srip108716 chr6 46310300 46310300 + unknown germline . no 226 .
srip108981 chr6 57486637 57486637 . unknown germline . no 226 PRIM2
srip109533 chr6 63368201 63368201 + unknown germline . no 226 .
srip111042 chr6 77980645 77980645 - unknown germline . no 226 .
srip112043 chr6 91669514 91669514 - unknown germline . no 226 .
srip112710 chr6 102283763 102283763 - unknown germline . no 226 GRIK2
srip113222 chr6 123647635 123647635 + unknown germline . no 226 TRDN
srip113493 chr6 130107444 130107444 + unknown germline . no 226 .
srip113819 chr6 142450105 142450105 - unknown germline . no 226 .
srip114433 chr6 148163579 148163579 + unknown germline . no 226 .
srip114758 chr6 148195798 148195798 + unknown germline . no 226 .
srip114920 chr6 155950297 155950297 - unknown germline . no 226 .
srip117994 chr7 61975156 61975156 . unknown germline . no 226 .
srip118891 chr7 70188682 70188682 - unknown germline . no 226 AUTS2
srip119814 chr7 84901724 84901724 - unknown germline . no 226 .
srip121745 chr7 107829256 107829256 + unknown germline . no 226 NRCAM
srip122273 chr7 110484750 110484750 + unknown germline . no 226 IMMP2L
srip122425 chr7 112789616 112789616 . unknown germline . no 226 .
srip124081 chr8 4452901 4452901 - unknown germline . no 226 CSMD1
srip124376 chr8 5829282 5829282 - unknown germline . no 226 .
srip126448 chr8 62115155 62115155 + unknown germline . no 226 NPM1P6
srip126877 chr8 67381884 67381884 - unknown germline . no 226 .
srip128266 chr8 87315042 87315042 + unknown germline . no 226 .
srip128733 chr8 104718993 104718993 - unknown germline . no 226 RIMS2
srip129648 chr8 119721694 119721694 - unknown germline . no 226 SAMD12-AS1
srip130132 chr8 131041227 131041227 + unknown germline . no 226 .
srip131081 chr9 6290487 6290487 + unknown germline . no 226 .
srip131392 chr9 8344967 8344967 + unknown germline . no 226 PTPRD
srip133181 chr9 32463883 32463883 - unknown germline . no 226 DDX58
srip133611 chr9 34904794 34904794 - unknown germline . no 226 .
srip135873 chr9 118083873 118083873 - unknown germline . no 226 DEC1
srip136778 chrX 25711261 25711261 . unknown germline . no 226 .
srip137572 chrX 55585154 55585154 - unknown germline . no 226 .
srip138349 chrX 66982762 66982762 - unknown germline . no 226 .
srip139777 chrX 98264296 98264296 - unknown germline . no 226 .
srip140461 chrX 111557754 111557754 - unknown germline . no 226 ZCCHC16
srip140815 chrX 119892837 119892837 - unknown germline . no 226 .
srip141051 chrX 122664860 122664860 - unknown germline . no 226 .
srip141382 chrX 129525275 129525275 - unknown germline . no 226 .